Single-cell RNA-seq AI analysis has become the default way to make sense of the millions of expression measurements a single experiment can now generate. Turning raw sequencing counts into ...

A framework for analyzing single-cell genomics data, in which geometrical properties are harnessed to obtain insights on cellular diversity, including precise clustering, clear visualizations, and ...

Burmese pythons, one of the state's most fearsome invasive species, have been an established presence in the Everglades for more the 25 years. Scientists thought for years salty water, predators, ...

The accuracy of genomic annotation is crucial for subsequent functional investigations; however, computational protocols used in high-throughput annotation of open reading frames (ORFs) can introduce ...

※Since long code blocks tend to get collapsed on Note, I plan to present two versions side-by-side: the first half is the MVP version, and the second half is the extended version (eraser, stamps, line ...

Abstract: The rapid advancement of scRNA-seq has generated massive data for cell type annotation. However, current automated annotation methods remain limited: most approaches separately model either ...

Understanding the structure and function of microbial genomes is crucial for uncovering their ecological roles, evolutionary trajectories, and potential applications in health, biotechnology, ...

Plant NBS disease resistance genes are crucial for plant immunity but are challenging to annotate accurately due to their complex structure, high copy numbers, and rapid evolution. NBSeer combines ...